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Depositordc.contributorPrendergast, Jamesen
Funderdc.contributor.otherBBSRC - Biotechnology and Biological Sciences Research Council
Funderdc.contributor.otherBill & Melinda Gates Foundation
Data Creatordc.creatorPrendergast, James
Data Creatordc.creatorDutta, Prasun
Data Creatordc.creatorTalenti, Andrea
Date Accessioneddc.date.accessioned2020-06-16T13:39:03Z
Citationdc.identifier.citationPrendergast, James; Dutta, Prasun; Talenti, Andrea. (2020). XP-EHH and XP-CLR scores across water buffalo and cattle breeds, [dataset]. University of Edinburgh. Roslin Institute.en
Persistent Identifierdc.identifier.urihttp://hdl.handle.net/10283/3665
Persistent Identifierdc.identifier.urihttps://doi.org/10.7488/ds/2849
Dataset Description (abstract)dc.description.abstractThis dataset consists of XP-EHH and XP-CLR scores calculated using the hapbin (https://github.com/evotools/hapbin) and xpclr (https://github.com/hardingnj/xpclr) software with default parameters across 79 water buffalo and 294 cattle whole genome sequences. The breeds being compared and the chromosome number are indicated in each file name. The water buffalo positions are with respect to the UOA_WB_1 genome assembly and the cattle with respect to ARS-UCD1.2. This dataset replaces an earlier version (https://doi.org/10.7488/ds/2721).
Dataset Description (TOC)dc.description.tableofcontentsInformation about the file/directory structure.
Publisherdc.publisherUniversity of Edinburgh. Roslin Institute
Relation (Is Referenced By)dc.relation.isreferencedbyhttps://www.bomabrowser.com/waterbuffalo/
Supersedesdc.relation.replaceshttps://doi.org/10.7488/ds/2721
Subjectdc.subjectgenomics
Subjectdc.subjectselection
Subjectdc.subjectXP-CLR
Subjectdc.subjectXP-EHH
Subjectdc.subjectwater buffalo
Subjectdc.subjectcattle
Subjectdc.subjectdomestication
Subjectdc.subjectselective sweep
Subject Classificationdc.subject.classificationVeterinary Sciences Agriculture and related subjects
Titledc.titleXP-EHH and XP-CLR scores across water buffalo and cattle breeds
Typedc.typedataset
Embargo Datedc.date.embargo2020-10-01


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