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Depositordc.contributorClark, Emily L
Funderdc.contributor.otherBBSRC - Biotechnology and Biological Sciences Research Councilen_UK
Spatial Coveragedc.coverage.spatialUKen
Spatial Coveragedc.coverage.spatialUNITED KINGDOMen
Data Creatordc.creatorTsang, Hiu-Gwen
Data Creatordc.creatorClark, Emily L
Data Creatordc.creatorMarkby, Greg A
Data Creatordc.creatorBush, Stephen J
Data Creatordc.creatorHume, David A
Data Creatordc.creatorCorcoran, Brendan M
Data Creatordc.creatorMacRae, Vicky E
Data Creatordc.creatorSummers, Kim M
Date Accessioneddc.date.accessioned2020-04-27T09:01:52Z
Date Availabledc.date.available2020-04-27T09:01:52Z
Citationdc.identifier.citationTsang, Hiu-Gwen; Clark, Emily L; Markby, Greg A; Bush, Stephen J; Hume, David A; Corcoran, Brendan M; MacRae, Vicky E; Summers, Kim M. (2020). Gene expression in the cardiovascular system of the domestic sheep (Ovis aries), [dataset]. University of Edinburgh. The Roslin Institute.. https://doi.org/10.7488/ds/2808.en
Persistent Identifierdc.identifier.urihttp://hdl.handle.net/10283/3618
Persistent Identifierdc.identifier.urihttps://doi.org/10.7488/ds/2808
Dataset Description (abstract)dc.description.abstractThis dataset includes gene expression estimates, from RNA-Seq, for seven cardiovascular and one skeletal muscle tissue from the sheep gene expression atlas dataset (https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1006997). The raw RNA-seq data are deposited in the European Nucleotide Archive (ENA) under study accession number PRJEB19199 (http://www.ebi.ac.uk/ena/data/view/PRJEB19199). For each tissue a set of expression estimates (averaged across biological replicates from where possible n=6 adult sheep), as transcripts per million (TPM), were obtained using the transcript quantification tool Kallisto v0.43.0. It was necessary to normalise these estimates to account for the two different library types (ribo-depleted total RNA (left ventricle) and poly-A selected mRNA (all other tissues).en_UK
Languagedc.language.isoengen_UK
Publisherdc.publisherUniversity of Edinburgh. The Roslin Institute.en_UK
Relation (Is Version Of)dc.relation.isversionofhttps://doi.org/10.7488/ds/2112en_UK
Rightsdc.rightsCreative Commons Attribution 4.0 International Public Licenseen
Subjectdc.subjectsheepen_UK
Subjectdc.subjectcardiovascular systemen_UK
Subjectdc.subjectgene expressionen_UK
Subjectdc.subjectRNA-seqen_UK
Subjectdc.subjecthearten_UK
Subjectdc.subjecttranscriptomeen_UK
Subject Classificationdc.subject.classificationBiological Sciences::Geneticsen_UK
Titledc.titleGene expression in the cardiovascular system of the domestic sheep (Ovis aries)en_UK
Alternative Titledc.title.alternativeGene expression estimates as TPM for seven cardiovascular and one skeletal muscle tissue from sheepen_UK
Typedc.typedataseten_UK

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