Characterisation of a second gain of function EDAR variant, encoding EDAR380R, in East Asia
Data CreatorSchoenebeck, Jeffrey
PublisherUniversity of Edinburgh. Roslin Institute and Royal (Dick) School of Veterinary Studies.
MetadataShow full item record
CitationSchoenebeck, Jeffrey; Riddell, Jon; Headon, Denis. (2020). Characterisation of a second gain of function EDAR variant, encoding EDAR380R, in East Asia, [dataset]. University of Edinburgh. Roslin Institute and Royal (Dick) School of Veterinary Studies.. https://doi.org/10.7488/ds/2798.
DescriptionBash scripts, R scripts, rehh output data.
R script designed to be called on by "Filter_VCF_and CALL_ON_R_v2.sh". Runs rehh on 2Mb interval. Arguments are provided when running the bash script. (2.115Kb)
Bash script to identify transversions and transitions of comparable allele frequencies to EDAR alleles. (2.571Kb)
Rmarkdown document documents EHH analysis and the production of plots. Use with "R_SUmmaryStats_2020MAR31.RData" file. (11.61Kb)
Directory containing interval data produced by R rehh package. Files in this directory were analysed with R_EJHG.Rmd (47.88Mb)