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Depositordc.contributorClark, Emily
Funderdc.contributor.otherBBSRC - Biotechnology and Biological Sciences Research Councilen_UK
Spatial Coveragedc.coverage.spatialUKen
Spatial Coveragedc.coverage.spatialUNITED KINGDOMen
Data Creatordc.creatorBush, Stephen J.
Data Creatordc.creatorMcCulloch, Mary E. B.
Data Creatordc.creatorMuriuki, Charity
Data Creatordc.creatorSalavati, Mazdak
Data Creatordc.creatorDavis, Gemma M.
Data Creatordc.creatorFarquhar, Iseabail L.
Data Creatordc.creatorLisowski, Z. M.
Data Creatordc.creatorArchibald, Alan L.
Data Creatordc.creatorHume, D. A.
Data Creatordc.creatorClark, E. L.
Date Accessioneddc.date.accessioned2018-07-10T15:11:03Z
Date Availabledc.date.available2018-07-10T15:11:03Z
Citationdc.identifier.citationBush, Stephen J.; McCulloch, Mary E. B.; Muriuki, Charity; Salavati, Mazdak; Davis, Gemma M.; Farquhar, Iseabail L.; Lisowski, Z. M.; Archibald, Alan L.; Hume, D. A.; Clark, E. L.. (2018). Comprehensive transcriptional profiling of the gastrointestinal tract of ruminants from birth to adulthood, [dataset]. The Roslin Institute. University of Edinburgh.. http://dx.doi.org/10.7488/ds/2372.en
Persistent Identifierdc.identifier.urihttp://hdl.handle.net/10283/3113
Persistent Identifierdc.identifier.urihttp://dx.doi.org/10.7488/ds/2372
Dataset Description (abstract)dc.description.abstractOne of the most significant physiological challenges to neonatal and juvenile ruminants is the development and establishment of the rumen. Using a subset of RNA-Seq data from our high-resolution atlas of gene expression in sheep (Ovis aries) we have provided the first comprehensive characterisation of transcription of the entire gastrointestinal (GI) tract during the transition from pre-ruminant to ruminant. The dataset comprises 168 tissue samples from sheep at four different time points (birth, one week, 8 weeks and adult). Included here are the gene expression estimates as transcripts per million (TPM) for individual sheep (Table S4) and averaged across individuals (Table S1).en_UK
Languagedc.language.isoengen_UK
Publisherdc.publisherThe Roslin Institute. University of Edinburghen_UK
Relation (Is Version Of)dc.relation.isversionofhttps://datashare.is.ed.ac.uk/handle/10283/2786en_UK
Relation (Is Referenced By)dc.relation.isreferencedbyhttps://www.biorxiv.org/content/early/2018/07/07/364752en_UK
Subjectdc.subjecttranscriptionen_UK
Subjectdc.subjectsheepen_UK
Subjectdc.subjectgoaten_UK
Subjectdc.subjectruminanten_UK
Subjectdc.subjectgastrointestinal tracten_UK
Subjectdc.subjectdevelopmenten_UK
Subjectdc.subjectmacrophageen_UK
Subjectdc.subjectimmunityen_UK
Subjectdc.subjectRNA-Seqen_UK
Subjectdc.subjectFAANGen_UK
Subjectdc.subjectgene expressionen_UK
Subject Classificationdc.subject.classificationBiological Sciences::Geneticsen_UK
Titledc.titleComprehensive transcriptional profiling of the gastrointestinal tract of ruminants from birth to adulthooden_UK
Alternative Titledc.title.alternativeRNASeq analysis of the ruminant GI tracten_UK
Typedc.typedataseten_UK

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