• A 1-dimensional statistical mechanics model for nucleosome positioning on genomic DNA 

    Tesoro, S.; Ali, I.; Morozov, A. N.; Sulaiman, N.; Marenduzzo, D.
    The first level of folding of DNA in eukaryotes is provided by the so-called “10-nm chromatin fibre”, where DNA wraps around histone proteins (∼10 nm in size) to form nucleosomes, which go on to create a zig-zagging ...
  • 2DChebClass 

    Goddard, Benjamin; Nold, Andreas; Kalliadasis, Serafim
    We present a Matlab implementation of a novel, efficient pseudo-spectral collocation scheme for the solution of stiff, non-local, non-linear PDEs in one and two spatial dimensions. In particular, we compute the non-local ...
  • Accounting for the Complex Hierarchical Topology of EEG Functional Connectivity in Network Binarisation 

    Smith, Keith
    Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG, such binarisation should take into account the complex ...
  • Acted clear speech corpus 

    Mayo, Catherine (LISTA Consortium: (i) Language and Speech Laboratory, Universidad del Pais Vasco, Spain and Ikerbasque, Spain; (ii) Centre for Speech Technology Research, University of Edinburgh, UK; (iii) KTH Royal Institute of Technology, Sweden; (iv) Institute of Computer Science, FORTH, Greece, 2013-09-24)
    Single male native British English talker recorded producing 25 TIMIT sentences in 5 conditions, two natural: (i) quiet, (ii) while the talker listened to high-intensity speech-shaped noise, and three acted: (i) as if to ...
  • Additional files for 'Comparison of the protein-coding genomes of three deep-sea, sulfur-oxidising bacteria: "Candidatus Ruthia magnifica", "Candidatus Vesicomyosocius okutanii" and Thiomicrospira crunogena' 

    McGill, Susan; Barker, Daniel
    Genome-wide protein sets input to OrthoMCL, OrthoMCL output, Perl script to count cross-species occurence of OrthoMCL groups, and output of Perl script, as used by McGill and Barker (2017, BMC Research Notes, submitted).
  • Adsorption Materials and Processes for Carbon Capture from Gas-Fired Power Plants- AmpGas 

    Gibson, J A Arran; Shiko, Elenica; Mangano, Enzo; Brandani, Stefano
    The key challenge in post combustion capture from gas fired power plants is related to the low CO2 concentration in the flue gas (4 to 8% by volume). This means that conventional amine processes will result in a relatively ...
  • Analysis Software for Model Checking Edinburgh Buses 

    Reijsbergen, Daniel; Gao, Wulinjian
    This software is supplementary material for the paper 'An automated methodology for analysing urban transportation systems using model checking' by Daniël Reijsbergen and Stephen Gilmore. It was used to construct the figures ...
  • Ancillary data used for global GPP simulations by the JULES land surface model for 2001-2010 

    Slevin, Darren
    This dataset contains the ancillary data (soil, vegetation, etc) used for simulations of Gross Primary Productivity (GPP) by the Joint UK Land Environment Simulator (JULES) Land Surface Model (LSM) at global scales for ...
  • ARC-Lake v1.1 - Ancillary 

    MacCallum, Stuart N; Merchant, Christopher J (University of Edinburgh. School of GeoSciences / European Space Agency, 2011-12-08)
    ARC-Lake v1.1 - Ancillary contains ancillary data products. This consists of the full resolution land/water mask used to determined where observations of Lake Surface Water Temperature (LSWT) and Lake Ice Cover (LIC) are ...
  • ARC-Lake v1.1 - Global 

    MacCallum, Stuart N; Merchant, Christopher J (University of Edinburgh. School of GeoSciences / European Space Agency, 2011-12-08)
    ARC-Lake v1.1 - Global contains data products with global coverage, i.e. data for all (available) lakes are included in each product. These data products contain observations of Lake Surface Water Temperature (LSWT) and ...
  • ARC-Lake v1.1 - Per-Lake 

    MacCallum, Stuart N; Merchant, Christopher J (University of Edinburgh. School of GeoSciences / European Space Agency, 2011-12-08)
    ARC-Lake v1.1 - Per-Lake contains data products on a lake-by-lake basis. These data products contain observations of Lake Surface Water Temperature (LSWT) and Lake Ice Cover (LIC) from the series of (Advanced) Along-Track ...
  • ARC-Lake v2.0 - Global 

    MacCallum, Stuart N; Merchant, Christopher J (University of Edinburgh. School of GeoSciences / European Space Agency, 2013-10-25)
    ARC-Lake v2.0 - Global contains data products with global coverage, i.e. data for all (available) lakes are included in each product. These data products contain observations of Lake Surface Water Temperature (LSWT) and ...
  • ARC-Lake v2.0 - Per-Lake 

    MacCallum, Stuart N; Merchant, Christopher J (University of Edinburgh. School of GeoSciences / European Space Agency, 2013-10-25)
    ARC-Lake v2.0 - Per-Lake contains data products on a lake-by-lake basis. These data products contain observations of Lake Surface Water Temperature (LSWT) and Lake Ice Cover (LIC) from the series of (Advanced) Along-Track ...
  • ARCHER Annual Report 2014 

    Simpson, Alan; Beech-Brandt, Jo; Booth, Stephen; Turner, Andy; Beech-Brandt, Jason; Jordan, Steve; Brown, Mike; Henty, David; Smith, Lorna
    ARCHER National Supercomputing Service Annual Report for 2014 and associated dataset
  • ARCHER Annual Survey Report 2014 

    Turner, Andrew
    Report and data from ARCHER (UK National HPC Service) annual user survey
  • ARCHER CSE Performance Data and Service Report: Q1 2014 

    Simpson, Alan; Turner, Andrew; Johnson, Chris; Smith, Lorna; Guo, Xu; Henty, David
    Data from SAFE (https://www.archer.ac.uk/safe) and Quarter 1 2014 Service Report from ARCHER Computational Science and Engineering Service. These contain data on usage and performance of the ARCHER CSE Service for quarter ...
  • ARCHER CSE Performance Data and Service Report: Q1 2015 

    Henty, David; Guo, Xu; Smith, Lorna; Simpson, Alan; Johnson, Chris; Turner, Andrew
    Data from SAFE (https://www.archer.ac.uk/safe) and Quarter 1 2015 Service Report from ARCHER Computational Science and Engineering Service. These contain data on usage and performance of the ARCHER CSE Service for Quarter ...
  • ARCHER CSE Performance Data and Service Report: Q1 2016 

    Turner, Andrew; Simpson, Alan; Smith, Lorna; Henty, David; Collis, Toni; Guo, Xu; Johnson, Chris
    Data from SAFE (https://www.archer.ac.uk/safe) and Quarter 1 2016 Service Report from ARCHER Computational Science and Engineering Service. These contain data on usage and performance of the ARCHER CSE Service for Quarter ...